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Host genetics of invasive Aspergillus and Candida infections

Wójtowicz, Agnieszka ; Bochud, Pierre-Yves

In: Seminars in Immunopathology, 2015, vol. 37, no. 2, p. 173-186

Narcolepsy-Associated HLA Class I Alleles Implicate Cell-Mediated Cytotoxicity

Tafti, Mehdi ; Lammers, Gert J. ; Dauvilliers, Yves ; Overeem, Sebastiaan ; Mayer, Geert ; Nowak, Jacek ; Pfister, Corinne ; Dubois, Valérie ; Eliaou, Jean-François ; Eberhard, Hans-Peter ; Liblau, Roland ; Wierzbicka, Aleksandra ; Geisler, Peter ; Bassetti, Claudio L. ; Mathis, Johannes ; Lecendreux, Michel ; Khatami, Ramin ; Heinzer, Raphaël ; Haba-Rubio, José ; Feketeova, Eva ; Baumann, Christian R. ; Kutalik, Zoltán ; Tiercy, Jean-Marie

In: Sleep, 2016, vol. 39, no. 3, p. 581-587

HLA supertype variation across populations: new insights into the role of natural selection in the evolution of HLA-A and HLA-B polymorphisms

dos Santos Francisco, Rodrigo ; Buhler, Stéphane ; Nunes, José ; Bitarello, Bárbara ; França, Gustavo ; Meyer, Diogo ; Sanchez-Mazas, Alicia

In: Immunogenetics, 2015, vol. 67, no. 11-12, p. 651-663

Comparative Genomics of Community-Associated Methicillin-Resistant Staphylococcus aureus Shows the Emergence of Clone ST8-USA300 in Geneva, Switzerland

Von Dach, Elodie ; Diene, Seydina M. ; Fankhauser, Carolina ; Schrenzel, Jacques ; Harbarth, Stephan ; François, Patrice

In: The Journal of Infectious Diseases, 2016, vol. 213, no. 9, p. 1370-1379

Reply to Planet et al

François, Patrice ; von Dach, Elodie ; Diene, Seydina M. ; Harbarth, Stephan ; Schrenzel, Jacques

In: The Journal of Infectious Diseases, 2016, vol. 214, no. 10, p. 1610-1611

Assessing statistical significance in multivariable genome wide association analysis

Buzdugan, Laura ; Kalisch, Markus ; Navarro, Arcadi ; Schunk, Daniel ; Fehr, Ernst ; Bühlmann, Peter

In: Bioinformatics, 2016, vol. 32, no. 13, p. 1990-2000

Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus

Stange, Madlen ; Sánchez-Villagra, Marcelo R. ; Salzburger, Walter ; Matschiner, Michael ; Hahn, Matthew ; Hahn, Matthew

In: Systematic Biology, 2018, vol. 67, no. 4, p. 681-699

NGS-based S. aureus typing and outbreak analysis in clinical microbiology laboratories : Lessons learned from a Swiss-wide proficiency test

Dylus, David ; Pillonel, Trestan ; Opota, Onya ; Wüthrich, Daniel ; Seth-Smith, Helena M. B. ; Egli, Adrian ; Leo, Stefano ; Lazarevic, Vladimir ; Schrenzel, Jacques ; Laurent, Sacha ; Bertelli, Claire ; Blanc, Dominique S. ; Neuenschwander, Stefan ; Ramette, Alban ; Falquet, Laurent ; Imkamp, Frank ; Keller, Peter M. ; Kahles, Andre ; Oberhaensli, Simone ; Barbié, Valérie ; Dessimoz, Christophe ; Greub, Gilbert ; Lebrand, Aitana

In: Frontiers in Microbiology, 2020, vol. 11, p. 591093

Whole genome sequencing (WGS) enables high resolution typing of bacteria up to the single nucleotide polymorphism (SNP) level. WGS is used in clinical microbiology laboratories for infection control, molecular surveillance and outbreak analyses. Given the large palette of WGS reagents and bioinformatics tools, the Swiss clinical bacteriology community decided to conduct a ring trial (RT) to...

Collaborating with complementary and alternative medicine (CAM) providers when writing HPV vaccine review articles

Deml, Michael J. ; Dietrich, Léna G. ; Wingeier, Bernhard ; Etter, Gisela ; Gallmann, Caesar ; Berger, Christoph ; Suggs, L. Suzanne ; Huber, Benedikt M. ; Tarr, Philip E.

In: Journal of clinical medicine, 2020, vol. 9, no. 2, p. 15 p

Novel strategies are needed to address vaccine hesitancy (VH), which correlates with complementary and alternative medicine (CAM). In Switzerland, CAM providers play important roles in vaccine counseling of vaccine hesitant (VH) parents, and traditional vaccination messaging tends to overlook CAM provider perspectives. In the setting of a Swiss national research program on VH, our key strategy ...

Biological sex influences antibody responses to routine vaccinations in the first year of life

Zimmermann, Petra ; Perrett, Kirsten P. ; Ritz,  Nicole ; Flanagan, Katie L. ; Robins-Browne, Roy ; Klis, Fiona R. M. van der ; Curtis, Nigel ; the MIS BAIR group

In: Acta Paediatrica, 2019, p. -

Aim We investigated the effect of early-life factors, namely sex, delivery mode, feeding method and antibiotic exposure, on antibody responses to routine vaccinations administered during the first year of life. Methods One and seven months after the primary course of routine vaccines and 1 month after routine vaccines at 12 months of age, antibodies against 26 vaccine antigens were measured...