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8 Ergebnisse 1
Postprint
Consortium of Swiss Academic Libraries

Knoto-ID: a tool to study the entanglement of open protein chains using the concept of knotoids

Dorier, Julien ; Goundaroulis, Dimos ; Benedetti, Fabrizio ; Stasiak, Andrzej ; Valencia, Alfonso ; Valencia, Alfonso

In: Bioinformatics, 2018, vol. 34, no. 19, p. 3402-3404

Postprint
Consortium of Swiss Academic Libraries

Generation of supercoils in nicked and gapped DNA drives DNA unknotting and postreplicative decatenation

Racko, Dusan ; Benedetti, Fabrizio ; Dorier, Julien ; Burnier, Yannis ; Stasiak, Andrzej

In: Nucleic Acids Research, 2015, vol. 43, no. 15, p. 7229-7236

Postprint
Consortium of Swiss Academic Libraries

Models that include supercoiling of topological domains reproduce several known features of interphase chromosomes

Benedetti, Fabrizio ; Dorier, Julien ; Burnier, Yannis ; Stasiak, Andrzej

In: Nucleic Acids Research, 2014, vol. 42, no. 5, p. 2848-2855

Postprint
Consortium of Swiss Academic Libraries

Effects of physiological self-crowding of DNA on shape and biological properties of DNA molecules with various levels of supercoiling

Benedetti, Fabrizio ; Japaridze, Aleksandre ; Dorier, Julien ; Racko, Dusan ; Kwapich, Robert ; Burnier, Yannis ; Dietler, Giovanni ; Stasiak, Andrzej

In: Nucleic Acids Research, 2015, vol. 43, no. 4, p. 2390-2399

Postprint
Consortium of Swiss Academic Libraries

Topological origins of chromosomal territories

Dorier, Julien ; Stasiak, Andrzej

In: Nucleic Acids Research, 2009, vol. 37, no. 19, p. 6316-6322

Postprint
Consortium of Swiss Academic Libraries

The role of transcription factories-mediated interchromosomal contacts in the organization of nuclear architecture

Dorier, Julien ; Stasiak, Andrzej

In: Nucleic Acids Research, 2010, vol. 38, no. 21, p. 7410-7421

Postprint
Consortium of Swiss Academic Libraries

Cooperative kinking at distant sites in mechanically stressed DNA

Lionberger, Troy A. ; Demurtas, Davide ; Witz, Guillaume ; Dorier, Julien ; Lillian, Todd ; Meyhöfer, Edgar ; Stasiak, Andrzej

In: Nucleic Acids Research, 2011, vol. 39, no. 22, p. 9820-9832

Postprint
Consortium of Swiss Academic Libraries

Modelling of crowded polymers elucidate effects of double-strand breaks in topological domains of bacterial chromosomes

Dorier, Julien ; Stasiak, Andrzej

In: Nucleic Acids Research, 2013, vol. 41, no. 14, p. 6808-6815

8 Ergebnisse 1