Fulltext

spacodiR: structuring of phylogenetic diversity in ecological communities

Eastman, Jonathan M. ; Paine, C. E. Timothy ; Hardy, Olivier J.

In: Bioinformatics, 2011, vol. 27, no. 17, p. 2437-2438

Ajouter à la liste personnelle
    Titre
    • spacodiR: structuring of phylogenetic diversity in ecological communities
    Auteur
    • Eastman, Jonathan M.. Department of Biological Sciences, Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow 83844, Institut für Evolutionsbiologie und Umweltwissenschaften, Universität Zürich, Zürich CH-8057 Switzerland and Evolutionary Biology and Ecology Unit, CP 160/12, Faculté des Sciences, Université Libre de Bruxelles, B-1050 Brussels, Belgium
    • Paine, C. E. Timothy. Department of Biological Sciences, Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow 83844, Institut für Evolutionsbiologie und Umweltwissenschaften, Universität Zürich, Zürich CH-8057 Switzerland and Evolutionary Biology and Ecology Unit, CP 160/12, Faculté des Sciences, Université Libre de Bruxelles, B-1050 Brussels, Belgium
    • Hardy, Olivier J.. Department of Biological Sciences, Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow 83844, Institut für Evolutionsbiologie und Umweltwissenschaften, Universität Zürich, Zürich CH-8057 Switzerland and Evolutionary Biology and Ecology Unit, CP 160/12, Faculté des Sciences, Université Libre de Bruxelles, B-1050 Brussels, Belgium
    Type de document
    • Postprint
    Identifiant OAI-PMH
    • oai:doc.rero.ch:303579
    Summary
    Motivation: spacodiR is a cross-platform package, written for the R environment, for studying partitioning of diversity among natural communities in space and time. Complementing and extending existing software, spacodiR allows for hypothesis testing and parameter estimation in studying spatial structuring of species-, phylogenetic- and trait diversities. Availability: Integrated with other software in the R environment and with well documented and demonstrated functions, spacodiR is an open-source package and available at http://cran.r-project.org. Contact: jonathan.eastman@gmail.com; ohardy@ulb.ac.be