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Graph neural networks : operators and architectures

Grattarola, Daniele ; Alippi, Cesare (Dir.) ; Livi, Lorenzo (Codir.)

Thèse de doctorat : Università della Svizzera italiana, 2021 ; 2021INFO014.

This thesis explores the field of graph neural networks, a class of deep learning models designed to learn representations of graphs. We organise the work into two parts. In the first part, we focus on the essential building blocks of graph neural networks. We present three novel operators for learning graph representations: one graph convolutional layer and two methods for pooling. We put...

NeuroMorphoVis: a collaborative framework for analysis and visualization of neuronal morphology skeletons reconstructed from microscopy stacks

Abdellah, Marwan ; Hernando, Juan ; Eilemann, Stefan ; Lapere, Samuel ; Antille, Nicolas ; Markram, Henry ; Schürmann, Felix

In: Bioinformatics, 2018, vol. 34, no. 13, p. i574-i582

Large-Eddy Simulation of Very-Large-Scale Motions in the Neutrally Stratified Atmospheric Boundary Layer

Fang, Jiannong ; Porté-Agel, Fernando

In: Boundary-Layer Meteorology, 2015, vol. 155, no. 3, p. 397-416

MyHip: supporting planning and surgical guidance for a better total hip arthroplasty : A pilot study

Schmid, Jérôme ; Chênes, Christophe ; Chagué, Sylvain ; Hoffmeyer, Pierre ; Christofilopoulos, Panayiotis ; Bernardoni, Massimiliano ; Charbonnier, Caecilia

In: International Journal of Computer Assisted Radiology and Surgery, 2015, vol. 10, no. 10, p. 1547-1556

Dictionary Learning for Fast Classification Based on Soft-thresholding

Fawzi, Alhussein ; Davies, Mike ; Frossard, Pascal

In: International Journal of Computer Vision, 2015, vol. 114, no. 2-3, p. 306-321

Layer-Dependent Short-Term Synaptic Plasticity Between Excitatory Neurons in the C2 Barrel Column of Mouse Primary Somatosensory Cortex

Lefort, Sandrine ; Petersen, Carl C.H.

In: Cerebral Cortex, 2017, vol. 27, no. 7, p. 3869-3878

SpotCaliper: fast wavelet-based spot detection with accurate size estimation

Püspöki, Zsuzsanna ; Sage, Daniel ; Ward, John Paul ; Unser, Michael

In: Bioinformatics, 2016, vol. 32, no. 8, p. 1278-1280

3D Scene Flow Estimation with a Piecewise Rigid Scene Model

Vogel, Christoph ; Schindler, Konrad ; Roth, Stefan

In: International Journal of Computer Vision, 2015, vol. 115, no. 1, p. 1-28

Visually-sensitive networks in essential tremor: evidence from structural and functional imaging

Tuleasca, Constantin ; Régis, Jean ; Najdenovska, Elena ; Witjas, Tatiana ; Girard, Nadine ; Thiran, Jean-Philippe ; Bach Cuadra, Meritxell ; Levivier, Marc ; Van De Ville, Dimitri

In: Brain, 2018, vol. 141, no. 6, p. e47-e47

DiversePathsJ: diverse shortest paths for bioimage analysis

Uhlmann, Virginie ; Haubold, Carsten ; Hamprecht, Fred A. ; Unser, Michael ; Murphy, Robert ; Murphy, Robert

In: Bioinformatics, 2018, vol. 34, no. 3, p. 538-540