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fastER: a user-friendly tool for ultrafast and robust cell segmentation in large-scale microscopy

Hilsenbeck, Oliver ; Schwarzfischer, Michael ; Loeffler, Dirk ; Dimopoulos, Sotiris ; Hastreiter, Simon ; Marr, Carsten ; Theis, Fabian J. ; Schroeder, Timm ; Murphy, Robert ; Murphy, Robert

In: Bioinformatics, 2017, vol. 33, no. 13, p. 2020-2028

SEEDS: Superpixels Extracted Via Energy-Driven Sampling

Van den Bergh, Michael ; Boix, Xavier ; Roig, Gemma ; Van Gool, Luc

In: International Journal of Computer Vision, 2015, vol. 111, no. 3, p. 298-314

Bayesian inference on stochastic gene transcription from flow cytometry data

Tiberi, Simone ; Walsh, Mark ; Cavallaro, Massimo ; Hebenstreit, Daniel ; Finkenstädt, Bärbel

In: Bioinformatics, 2018, vol. 34, no. 17, p. i647-i655

Efficient computational strategies for doubly intractable problems with applications to Bayesian social networks

Caimo, Alberto ; Mira, Antonietta

In: Statistics and Computing, 2015, vol. 25, no. 1, p. 113-125

Bridging Inter- and Intraspecific Trait Evolution with a Hierarchical Bayesian Approach

Kostikova, Anna ; Silvestro, Daniele ; Pearman, Peter B. ; Salamin, Nicolas

In: Systematic Biology, 2016, vol. 65, no. 3, p. 417-431

Introduction to "On the use of Markov chain Monte Carlo methods for the sampling of mixture models” by R. Douc, F. Maire, J. Olsson

Peluso, Stefano

In: Statistics and Computing, 2015, vol. 25, no. 1, p. 93-94

Accelerating Bayesian inference for evolutionary biology models

Meyer, Xavier ; Chopard, Bastien ; Salamin, Nicolas ; Kelso, Janet ; Kelso, Janet

In: Bioinformatics, 2017, vol. 33, no. 5, p. 669-676

A multi-platform package for the analysis of intra- and interspecific trait evolution

Gaboriau, Théo ; Mendes, Fábio K. ; Joly, Simon ; Silvestro, Daniele ; Salamin, Nicolas

In: Methods in Ecology and Evolution, 2020, p. -

Evolutionary forces affect the distribution of phenotypes both within and among species. Yet, at the macro‐evolutionary scale, the evolution of intraspecific variance is rarely considered. Here, we present an r and a BEAST 2 implementation that extends the JIVE (Joint inter‐ and Intraspecific Variance Evolution) model aimed at the analysis of continuous trait evolution at both inter‐...

Monitoring rock glacier kinematics with satellite synthetic aperture radar

Strozzi, Tazio ; Caduff, Rafael ; Jones, Nina ; Barboux, Chloé ; Delaloye, Reynald ; Bodin, Xavier ; Kääb, Andreas ; Mätzler, Eva ; Schrott, Lothar

In: Remote Sensing, 2020, vol. 12, no. 3, p. 559

Active rock glaciers represent the best visual expression of mountain permafrost that can be mapped and monitored directly using remotely sensed data. Active rock glaciers are bodies that consist of a perennially frozen ice/rock mixture and express a distinct flow-like morphology indicating downslope permafrost creep movement. Annual rates of motion have ranged from a few millimeters to...

Bayesian dependence tests for continuous, binary and mixed continuous-binary variables

Benavoli, Alessio ; De Campos, Cassio P.

In: Entropy, 2016, vol. 18, no. 9, p. 326

Tests for dependence of continuous, discrete and mixed continuous-discrete variables are ubiquitous in science. The goal of this paper is to derive Bayesian alternatives to frequentist null hypothesis significance tests for dependence. In particular, we will present three Bayesian tests for dependence of binary, continuous and mixed variables. These tests are nonparametric and based on the...