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Consortium of Swiss Academic Libraries

MBV: a method to solve sample mislabeling and detect technical bias in large combined genotype and sequencing assay datasets

Fort, Alexandre ; Panousis, Nikolaos I. ; Garieri, Marco ; Antonarakis, Stylianos E. ; Lappalainen, Tuuli ; Dermitzakis, Emmanouil T. ; Delaneau, Olivier ; Stegle, Oliver ; Stegle, Oliver

In: Bioinformatics, 2017, vol. 33, no. 12, p. 1895-1897

Consortium of Swiss Academic Libraries

Assessing allele-specific expression across multiple tissues from RNA-seq read data

Pirinen, Matti ; Lappalainen, Tuuli ; Zaitlen, Noah A. ; Dermitzakis, Emmanouil T. ; Donnelly, Peter ; McCarthy, Mark I. ; Rivas, Manuel A.

In: Bioinformatics, 2015, vol. 31, no. 15, p. 2497-2504

Consortium of Swiss Academic Libraries

Identification and removal of low-complexity sites in allele-specific analysis of ChIP-seq data

Waszak, Sebastian M. ; Kilpinen, Helena ; Gschwind, Andreas R. ; Orioli, Andrea ; Raghav, Sunil K. ; Witwicki, Robert M. ; Migliavacca, Eugenia ; Yurovsky, Alisa ; Lappalainen, Tuuli ; Hernandez, Nouria ; Reymond, Alexandre ; Dermitzakis, Emmanouil T. ; Deplancke, Bart

In: Bioinformatics, 2014, vol. 30, no. 2, p. 165-171

Consortium of Swiss Academic Libraries

Evolutionary history of regulatory variation in human populations

Lappalainen, Tuuli ; Dermitzakis, Emmanouil T.

In: Human Molecular Genetics, 2010, vol. 19, no. R2, p. R197-R203

Consortium of Swiss Academic Libraries

Janus—a comprehensive tool investigating the two faces of transcription

Barann, Matthias ; Esser, Daniela ; Klostermeier, Ulrich C. ; Lappalainen, Tuuli ; Luzius, Anne ; Kuiper, Jan W. P. ; Ammerpohl, Ole ; Vater, Inga ; Siebert, Reiner ; Amstislavskiy, Vyacheslav ; Sudbrak, Ralf ; Lehrach, Hans ; Schreiber, Stefan ; Rosenstiel, Philip

In: Bioinformatics, 2013, vol. 29, no. 13, p. 1600-1606

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