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The neXtProt knowledgebase on human proteins: current status

Gaudet, Pascale ; Michel, Pierre-André ; Zahn-Zabal, Monique ; Cusin, Isabelle ; Duek, Paula D. ; Evalet, Olivier ; Gateau, Alain ; Gleizes, Anne ; Pereira, Mario ; Teixeira, Daniel ; Zhang, Ying ; Lane, Lydie ; Bairoch, Amos

In: Nucleic Acids Research, 2015, vol. 43, no. D1, p. D764-D770

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    Title
    • The neXtProt knowledgebase on human proteins: current status
    Author
    • Gaudet, Pascale. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Michel, Pierre-André. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Zahn-Zabal, Monique. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Cusin, Isabelle. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Duek, Paula D.. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Evalet, Olivier. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Gateau, Alain. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Gleizes, Anne. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Pereira, Mario. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Teixeira, Daniel. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Zhang, Ying. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Lane, Lydie. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    • Bairoch, Amos. CALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1211
    Document Type
    • Postprint
    Language
    • English
    Published in
    • Nucleic Acids Research, 2015, vol. 43, no. D1, p. D764-D770. Oxford University Press
    Other Version
    Classification
    • Health
    OAI-PMH Identifier
    • oai:doc.rero.ch:299048
    Summary
    neXtProt (http://www.nextprot.org) is a human protein-centric knowledgebase developed at the SIB Swiss Institute of Bioinformatics. Focused solely on human proteins, neXtProt aims to provide a state of the art resource for the representation of human biology by capturing a wide range of data, precise annotations, fully traceable data provenance and a web interface which enables researchers to find and view information in a comprehensive manner. Since the introductory neXtProt publication, significant advances have been made on three main aspects: the representation of proteomics data, an extended representation of human variants and the development of an advanced search capability built around semantic technologies. These changes are presented in the current neXtProt update