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Université de Fribourg

Different Mi-2 Complexes for Various Developmental Functions in Caenorhabditis elegans

Passannante, Myriam ; Marti, Claude-Olivier ; Pfefferli, Catherine ; Moroni, Paolo S. ; Kaeser-Pebernard, Stéphanie ; Puoti, Alessandro ; Hunziker, Peter ; Wicky, Chantal ; Müller, Fritz

In: PLoS ONE, 2010, vol. 5, no. 10, p. e13681

Biochemical purifications from mammalian cells and Xenopus oocytes revealed that vertebrate Mi-2 proteins reside in multisubunit NuRD (Nucleosome Remodeling and Deacetylase) complexes. Since all NuRD subunits are highly conserved in the genomes of C. elegans and Drosophila, it was suggested that NuRD complexes also exist in invertebrates. Recently, a novel dMec complex, composed of dMi-2 and...

Université de Fribourg

The C. elegans Hox gene ceh-13 regulates cell migration and fusion in a non-colinear way. Implications for the early evolution of Hox clusters

Tihanyi, Borbála ; Vellai, Tibor ; Regős, Ágnes ; Ari, Eszter ; Müller, Fritz ; Takács-Vellai, Krisztina

In: BMC Developmental Biology, 2010, vol. 10, no. 78, p. 78

Background: Hox genes play a central role in axial patterning during animal development. They are clustered in the genome and specify cell fate in sequential domains along the anteroposterior (A-P) body axis in a conserved order that is co-linear with their relative genomic position. In the soil worm Caenorhabditis elegans, this striking rule of co-linearity is broken by the anterior Hox gene...

Université de Fribourg

Deciphering protein kinase specificity through large-scale analysis of yeast phosphorylation site motifs

Mok, Janine ; Kim, Philip M. ; Lam, Hugo Y. K. ; Piccirillo, Stacy ; Zhou, Xiuqiong ; Jeschke, Grace R. ; Sheridan, Douglas L. ; Parker, Sirlester A. ; Desai, Ved ; Jwa, Miri ; Cameroni, Elisabetta ; Niu, Hengyao ; Good, Matthew ; Remenyi, Attila ; Ma, Jia-Lin Nianhan ; Sheu, Yi-Jun ; Sassi, Holly E. ; Sopko, Richelle ; Chan, Clarence S. M. ; De Virgilio, Claudio ; Hollingsworth, Nancy M. ; Lim, Wendell A. ; Stern, David F. ; Stillman, Bruce ; Andrews, Brenda J. ; Gerstein, Mark B. ; Snyder, Michael ; Turk, Benjamin E.

In: Science Signaling, 2010, vol. 3, no. 109, p. ra12

Phosphorylation is a universal mechanism for regulating cell behavior in eukaryotes. Although protein kinases target short linear sequence motifs on their substrates, the rules for kinase substrate recognition are not completely understood. We used a rapid peptide screening approach to determine consensus phosphorylation site motifs targeted by 61 of the 122 kinases in Saccharomyces cerevisiae....

Université de Fribourg

The Mi-2 nucleosome-remodeling protein LET-418 is targeted via LIN-1/ETS to the promoter of lin-39/Hox during vulval development in C. elegans

Guerry, Frédéric ; Marti, Claude-Olivier ; Zhang, Yue ; Moroni, Paolo S. ; Jaquiéry, Emilie ; Müller, Fritz

In: Developmental Biology, 2007, vol. 206, no. 2, p. 469-479

The fate of the vulval cells in Caenorhabditis elegans is specified, at least in part, through a highly conserved RTK/Ras mediated signaling cascade that negatively regulates the activity of the ETS-like transcription factor LIN-1. The Hox gene lin-39 functions downstream of both, the LIN-3/RTK/Ras pathway and LIN-1 and plays a pivotal role in controlling vulva cell competence and...

Université de Fribourg

Identification of differentially expressed target genes of human nucleosome remodelling Mi-2 orthologue LET-418 in "C. elegans"

Zhang, Yue ; Müller, Fritz (Dir.)

Thèse de doctorat : Université de Fribourg, 2006 ; no. 1532.

Les complexes multi-protéiques remodelant la chromatine ont été démontrés comme étant impliqués dans différents procédés tels la transcription, la réplication, l’assemblage de la chromatine et la condensation des chromosomes. Des mutations dans les composants de ces complexes multi-protéiques causent diverses maladies chez l’être humain, comme la maladie d’Alzheimer ou...

Université de Fribourg

Transcriptional control of Notch signaling by a HOX and a PBX/EXD protein during vulval development in C. elegans

Takács-Vellai, Krisztina ; Vellai, Tibor ; Chen, Estella B. ; Zhang, Yue ; Guerry, Frédéric ; Stern, Michael J. ; Müller, Fritz

In: Developmental Biology, 2007, vol. 302, no. 2, p. 661–669

The Notch signaling pathway controls growth, differentiation and patterning in divergent animal phyla; in humans, defective Notch signaling has been implicated in cancer, stroke and neurodegenerative disorders. Despite its developmental and medical significance, little is known about the factors that render cells to become competent for Notch signaling. Here we show that during vulval development...

Université de Fribourg

Influence of TOR kinase on lifespan in C. elegans

Vellai, Tibor ; Takacs-Vellai, Krisztina ; Zhang, Yue ; Kovacs, Attila L. ; Orosz, László ; Müller, Fritz

In: Nature, 2003, vol. 426, p. 620

The group of enzymes known as TOR (for 'target of rapamycin') kinases regulates cell growth and proliferation in response to nutrients and hormone-dependent mitogenic signals1, 2. Here we show that TOR deficiency in the nematode Caenorhabditis elegans more than doubles its natural lifespan. This new function for TOR signalling in ageing control may represent a link between...

Université de Fribourg

Stabilizing factors interact in promoting host–parasite coexistence

Flatt, Thomas ; Scheuring, István

In: Journal of Theoretical Biology, 2004, vol. 228(2), p. 241

Understanding the mechanisms that promote coexistence among species is a fundamental problem in evolutionary ecology. Such mechanisms include environmental noise, spatial population structure, density dependence, and genetic variation. In natural populations such factors may exert combined effects on coexistence. Thus, to disentangle the contribution of several factors to coexistence, their...

Université de Fribourg

The Caenorhabditis elegans ortholog of C21orf80, a potential new protein O-fucosyltransferase, is required for normal development

Menzel, Olivier ; Vellai, Tibor ; Takacs-Vellai, Krisztina ; Reymond, Alexandre ; Müller, Fritz ; Antonarakis, Stylianos E. ; Guipponi, Michel

In: Genomics, 2004, vol. 84, p. 320-330

Down syndrome (DS), as a phenotypic result of trisomy 21, is the most frequent aneuploidy at birth and the most common known genetic cause of mental retardation. DS is also characterized by other phenotypes affecting many organs, including brain, muscle, heart, limbs, gastrointestinal tract, skeleton, and blood. Any of the human chromosome 21 (Hsa21) genes may contribute to some of the DS...