Université de Fribourg

Transposition of tn125 encoding the ndm-1 carbapenemase in Acinetobacter baumannii

Bontron, Séverine ; Nordmann, Patrice ; Poirel, Laurent

In: Antimicrobial Agents and Chemotherapy, 2016, vol. 60, no. 12, p. 7245–7251

The blaNDM-1 gene encodes a carbapenemase that confers resistance to almost all β-lactams, including last-resort carbapenems. This is increasingly reported worldwide in nosocomial and community-acquired Gram-negative bacteria. Acinetobacter baumannii is an important opportunistic pathogen that is considered an intermediate reservoir for the blaNDM-1 gene. In this species, the blaNDM-1 gene...

Université de Fribourg

Real-time PCR for detection of plasmid-mediated polymyxin resistance (mcr-1) from cultured bacteria and stools

Bontron, Séverine ; Poirel, Laurent ; Nordmann, Patrice

In: Journal of Antimicrobial Chemotherapy, 2016, p. dkw139

The aim of the study was to develop a simple assay for rapid detection of the mcr-1 gene, recently identified as a source of plasmid-mediated acquired resistance to polymyxins in Enterobacteriaceae.Methods: A SYBR Green-based real-time PCR assay was designed for detection of the mcr-1 gene. This assay was applied to cultured bacteria and to spiked human and cattle stools.Results: The mcr-1...

Université de Fribourg

Intraspecies transfer of the chromosomal Acinetobacter baumannii blaNDM-1 carbapenemase gene

Krahn, Thomas ; Wibberg, Daniel ; Maus, Irena ; Winkler, Anika ; Bontron, Séverine ; Sczyrba, Alexander ; Nordmann, Patrice ; Pühler, Alfred ; Poirel, Laurent ; Schlüter, Andreas

In: Antimicrobial Agents and Chemotherapy, 2016, vol. 60, no. 5, p. 3032–3040

The species Acinetobacter baumannii is one of the most important multidrug-resistant human pathogens. To determine its virulence and antibiotic resistance determinants, the genome of the nosocomial blaNDM-1-positive A. baumannii strain R2090 originating from Egypt was completely sequenced. Genome analysis revealed that strain R2090 is highly related to the...

Université de Fribourg

In vitro prediction of the evolution of the GES-1 β-lactamase hydrolytic activity

Bontron, Séverine ; Poirel, Laurent ; Nordmann, Patrice

In: Antimicrobial Agents and Chemotherapy, 2015, p. AAC.04450–14

Resistance to ß-lactams is constantly increasing, due to the emergence of totally new enzymes, but also to the evolution of pre-existing ß-lactamases. GES-1 is a clinically-relevant extended-spectrum β-lactamase (ESBL) hydrolyzing penicillins and broad-spectrum cephalosporins, but sparing monobactams and carbapenems. However, several GES-1 variants (i.e. GES-2 and GES-5) previously identified...

Université de Fribourg

TORC1 regulates Pah1 phosphatidate phosphatase activity via the Nem1/Spo7 protein phosphatase complex

Dubots, Emmanuelle ; Cottier, Stéphanie ; Péli-Gulli, Marie-Pierre ; Jaquenoud, Malika ; Bontron, Séverine ; Schneiter, Roger ; Virgilio, Claudio De

In: PLoS ONE, 2014, vol. 9, no. 8, p. e104194

The evolutionarily conserved target of rapamycin complex 1 (TORC1) controls growth-related processes such as protein, nucleotide, and lipid metabolism in response to growth hormones, energy/ATP levels, and amino acids. Its deregulation is associated with cancer, type 2 diabetes, and obesity. Among other substrates, mammalian TORC1 directly phosphorylates and inhibits the phosphatidate phosphatase...

Université de Fribourg

Quantification of mRNA stability of stress-responsive yeast genes following conditional excision of open reading frames

Talarek, Nicolas ; Bontron, Séverine ; De Virgilio, Claudio

In: RNA Biology, 2013, vol. 10, no. 8, p. 1299–1306

Eukaryotic cells rapidly adjust the levels of mRNAs in response to environmental stress primarily by controlling transcription and mRNA turnover. How different stress conditions influence the fate of stress-responsive mRNAs, however, is relatively poorly understood. This is largely due to the fact that mRNA half-life assays are traditionally based on interventions (e.g., temperature-shifts using...

Université de Fribourg

Yeast endosulfines control entry into quiescence and chronological life span by inhibiting protein phosphatase 2A

Bontron, Séverine ; Jaquenoud, Malika ; Vaga, Stefania ; Talarek, Nicolas ; Bodenmiller, Bernd ; Aebersold, Ruedi ; De Virgilio, Claudio

In: Cell Reports, 2012, vol. 3, no. 1, p. 16–22

The TORC1 and PKA protein kinases are central elements of signaling networks that regulate eukaryotic cell proliferation in response to growth factors and/or nutrients. In yeast, attenuation of signaling by these kinases following nitrogen and/or carbon limitation activates the protein kinase Rim15, which orchestrates the initiation of a reversible cellular quiescence program to ensure normal...

Université de Fribourg

Leucyl-tRNA synthetase controls TORC1 via the EGO complex

Bonfils, Grégory ; Jaquenoud, Malika ; Bontron, Séverine ; Ostrowicz, Clemens ; Ungermann, Christian ; De Virgilio, Claudio

In: Molecular Cell, 2012, vol. 46, no. 1, p. 105–110

The target of rapamycin complex 1 (TORC1) is an essential regulator of eukaryotic cell growth that responds to growth factors, energy levels, and amino acids. The mechanisms through which the preeminent amino acid leucine signals to the TORC1-regulatory Rag GTPases, which activate TORC1 within the yeast EGO complex (EGOC) or the structurally related mammalian Rag-Ragulator complex, remain...

Université de Fribourg

Initiation of the TORC1-regulated G0 program requires Igo1/2, which license specific mRNAs to evade degradation via the 5'-3' mRNA decay pathway

Talarek, Nicolas ; Cameroni, Elisabetta ; Jaquenoud, Malika ; Luo, Xuan ; Bontron, Séverine ; Lippman, Soyeon ; Devgan, Geeta ; Snyder, Michael ; Broach, James R. ; De Virgilio, Claudio

In: Molecular Cell, 2010, vol. 38, no. 3, p. 345-355

Eukaryotic cell proliferation is controlled by growth factors and essential nutrients, in the absence of which cells may enter into a quiescent (G0) state. In yeast, nitrogen and/or carbon limitation causes downregulation of the conserved TORC1 and PKA signaling pathways and, consequently, activation of the PAS kinase Rim15, which orchestrates G0 program initiation and ensures proper life span by...

Université de Fribourg

Sumoylation of Drosophila SU(VAR)3-7 is required for its heterochromatic function

Reo, Emanuela ; Seum, Carole ; Spierer, Pierre ; Bontron, Séverine

In: Nucleic Acids Research, 2010, p. -

In Drosophila, SU(VAR)3-7 is an essential heterochromatin component. It is required for proper chromatin condensation, and changing its dose modifies position-effect variegation. Sumoylation is a post-translational modification shown to play a role in diverse biological processes. Here, we demonstrate that sumoylation is essential for proper heterochromatin function in Drosophila...