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ViralZone: recent updates to the virus knowledge resource

Masson, Patrick ; Hulo, Chantal ; De Castro, Edouard ; Bitter, Hans ; Gruenbaum, Lore ; Essioux, Laurent ; Bougueleret, Lydie ; Xenarios, Ioannis ; Le Mercier, Philippe

In: Nucleic Acids Research, 2013, vol. 41, no. D1, p. D579-D583

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    Titel
    • ViralZone: recent updates to the virus knowledge resource
    Autor
    • Masson, Patrick. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    • Hulo, Chantal. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    • De Castro, Edouard. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    • Bitter, Hans. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    • Gruenbaum, Lore. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    • Essioux, Laurent. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    • Bougueleret, Lydie. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    • Xenarios, Ioannis. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    • Le Mercier, Philippe. SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, Centre Médical Universitaire, CH-1211 Geneva 4, Switzerland, Translational Research Sciences, Hoffmann-La Roche Drug Discovery & Early Development, 340 Kingsland Street, Nutley, NJ 07110NJ, USA, Hoffmann La Roche, Bioinformatics and Exploratory Statistics Department, pRED, Grenzacherstrasse 124, 4070 Basel, Switzerland and SIB Swiss Institute of Bioinformatics, Vital-IT Group, Quartier Sorge—Bâtiment Génopode, 1015, Lausanne, Switzerland
    Dokumententyp
    • Postprint
    Sprache
    • Englisch
    Veröffentlicht in
    • Nucleic Acids Research, 2013, vol. 41, no. D1, p. D579-D583. Oxford University Press
    Andere elektronische Ausgabe
    Klassifikation
    • Gesundheit
    Schlagwörter
    OAI-PMH-ID
    • oai:doc.rero.ch:304935
    Summary
    ViralZone (http://viralzone.expasy.org) is a knowledge repository that allows users to learn about viruses including their virion structure, replication cycle and host-virus interactions. The information is divided into viral fact sheets that describe virion shape, molecular biology and epidemiology for each viral genus, with links to the corresponding annotated proteomes of UniProtKB. Each viral genus page contains detailed illustrations, text and PubMed references. This new update provides a linked view of viral molecular biology through 133 new viral ontology pages that describe common steps of viral replication cycles shared by several viral genera. This viral cell-cycle ontology is also represented in UniProtKB in the form of annotated keywords. In this way, users can navigate from the description of a replication-cycle event, to the viral genus concerned, and the associated UniProtKB protein records